陈旻昕


作者

时间:2018-11-02

内容

副教授


信息与计算科学系--计算数学组



研究方向:分子模拟, 计算结构生物学

Research Interests:

Molecular modeling, computational structural biology


Education:


Sept. 1997 – Janu 2001 BS, Soochow University Major: Mathematics

Sept. 2001 – Janu 2006 PhD, Academy of mathematics and system science, Chinese Academy of Sciences Major: Computational Mathematics



Experience:


Senior Research Assistant,USTC-CityU Joint Advanced Research Centre,Suzhou, China 2006.11- 2007.11.

Lecturer, Department of Mathematics, Soochow University, Suzhou, China 2007.11 - 2013.7.

Post-doc Fellow, Department of Mathematics, Penn State University, USA 2012.10 - 2014.2.

Associate Professor, Department of Mathematics, Soochow University, Suzhou, China 2013.7– present



Publication (selected papers):


  1. Minxin Chen, Xiantao Li, and Chun Liu, Computation of the memory functions in the generalized Langevin models for collective dynamics of macromolecules The Journal of Chemical Physics 141, 064112 (2014);

  2. Shixin Xu, Minxin Chen, Sheereen Majd, Xingye Yue, and Chun Liu Modeling and Simulating Asymmetrical Conductance Changes in Gramicidin Pores, Mol. Based Math. Biol. 2014; 2:34–55

  3. Minxin Chen, and B. Z. Lu, Advances in biomolecular surface meshing and its applications to mathematical modeling, Chinese Science Bulletin, 58(16):1843-1849, 2013

  4. Bin Tu, Minxin Chen, Yan Xie, Linbo Zhang, Bob Eisenberg, and Benzhuo Lu, A Parallel Finite Element Simulator for Ion Transport through Three-dimensional Ion Channel Systems, J. Comput. Chem. 34(24): 2065-2078, 2013

  5. Minxin Chen, Bin Tu, Benzhuo Lu, Surface Triangular Mesh and Volume Tetrahedral Mesh Generation for Biomolecular Modeling, a book chapter in “Image-based Geometric Modeling and Mesh Generation”,Springer, Berlin Heidelberg, 2013, XI, p85-106.

  6. Minxin Chen, Bin Tu, Benzhuo Lu, Triangulated Manifold Meshing Method Preserving Molecular Surface Topology, Journal of Molecular Graphics and Modelling, 38: 411-418, 2012

  7. Minxin Chen, Benzhuo Lu, TMSmesh: A Robust Method for Molecular Surface Mesh Generation using Trace Technique, J. Chem. Theory Comput., 7:203-212, 2011

  8. Minxin Chen, Bingchuan Liu, Wenying Yan, Bairong Shen, Wavelet Transform Based Protein Decoy Discrimination, ICBBE2009, the 3rd International Conference on Bioinformatics and Biomedical Engineering.

  9. Minxin Chen, Modified RATTLE Method for Rigid Body Dynamics in Cartesian Coordinates, Commun. in Comput. Phys., 2(3):530-544, 2007.



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